Forensic RNA Knowledge Base

Sequence Details

Symbol

TTTY15:3

Sequence Length

398 nt

GC Content

0.5201

CAGCCGGGUUCAAUGCGCCAUAUUGAAGAGGACGGGUCUAAUAGAUCGCUGGAGACACAAUUUAACUGAACCCCGCCCGUUGUGGACUGACUUUGAUGCUCUGAGUCCCUCCCUCCUUCACGCCGCUAGCAGGCCCUGAUGUAGAUUGCCUUUGUCUUACUUGGGACGUUUACCUGAGCGCUUGGUGCUGGUGUCGGGACCGGGAGAUAGGAGUGUCUCAGGAGAGACCUGGCCGAAAACCGCGAGAAAGAAAAGUGAAGCCUAGUGAAACUGCCUUUGCAGUGACUCAAGAAAAACUCAUCACCUGGAGUCCGUGUAAGCUCGGCGACAGCCCUAGCAGCGAGGCCAAAACAGUUUGGGAAGAAAGAAAACCUAAAGUAUUUGCCGUUGGUGAUUCA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-113 kcal/mol

Ensemble Metrics

Free Energy: -120.86

Frequency: 0.0000

Diversity: 120.36

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.(((((((...((((..........)).)).((((..(((....))).))))..........))))))).((((((((((((((...............)))))(((((((((..((((((.((.(((((.((.(.((((((..(((..((...))..)))..)))))).).)).))))).)).)))))).))))..))))).((((..((((.((((.....))))(((((....((((.........................(((((....)))))(((((.((.............)).))))))))).....)))))))))..)))))))))).)))((((..(.((((((...........)))))).).))))..))))........

Thermodynamic Ensemble Prediction

..(((((((({,.{{((({.,,.......||.|{((((,..{(({{.,.((....}}}.,}}},..,)},,))}||||{||||||,(({,,...(({{,{{{,||||.(((((((((..((((((,{(.(((((.((.(.((((((..(((..({...})..)))..)))))).).)).))))).)),}))))).))))..))))).,,||,}}||||(||,.,}}})))}({,{,....{{{,.,........,,,..,,|,.,,...(((((....)))))|||||.||.......,.,,,.,,.}))))}}))},}}})))))..,,,.},,|}||}||,|||,{({,.{.((((((...........)))))).).))))}),))),)}.....