Forensic RNA Knowledge Base

Sequence Details

Symbol

XIST:51

Sequence Length

315 nt

GC Content

0.5048

GUGCUGAUCACCAAGGCCCUUUUUCCUGGCCUGGUAUGCGUGUGAUUAUGUUUGUCCCGGUUCCUGUGUAUUAGACAUGGAAGCCUCCCCUGCCACACUCCACCCCCAAUCUUCCUUUCCCUUCCGGCAGGGAGUGCCCUCUCCAUAAGACGCUUACGUUUGGACAAUCAAGGUGCACAGUUGUAAGUGACCACAGGCAUACACCUUGGACAUUAAUGUGCAUAACCACUUUGCCCAUUCCAUCUGAAUAAGGUCCUACUCUCAGAUGCCCUUUGCAGUACAGCAGGGGUACUGAAUCACCAAGGCCCUUUUUCU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-87.77 kcal/mol

Ensemble Metrics

Free Energy: -93.22

Frequency: 0.0001

Diversity: 85.19

Structure Visualization

Structure Prediction

MFE Structure Prediction

.........((((.((((.........))))))))..(((.(((.((((((.(((((.(((.((((((........(((((.(((((((.((((...............................))))))))).))....)))))....((((((((.(((..((.......))..))).))))))))..)))))).....)))..))))).......)))))).)))..)))...........(((.((((.(((....((((.(((((((.((......))))))))))))).......))).)))).))).

Thermodynamic Ensemble Prediction

..,......{{(,{((((.........))))))||{{((,{(((.{{{({{.(((({.((({((((((,.....}}||||{,{||{,(((((((...............................)))))))}|.}}..,.|}}},..{,(({{{{||,|||,,{{.....,}})},)}}.}}}}})))..))))}),},,,,}}.,|||}}...{{{.|||,,,.,,,..))).}}},.,,...(((.{(((.(((....((((.((((({{{((......))))))))))))).......))).)))}.))).