Sequence Details

BLAST PRIMER
Symbol
XIST:66
Sequence Length
402 nt
GC Content
0.4279
AAAAGCUCACUACCACUGGGCAACAACCCUAGGUCAGGAGGUUCUGUCAAGAUACUUUCCUGGUCCCAGAUAGGAAGAUAAAGUCUCAAAAACAACCACCACACGUCAAGCUCUUCAUUGUUCCUAUCUGCCAAAUCAUUAUACUUCCUACAAGCAGUGCAGAGAGCUGAGUCUUCAGCAGGUCCAAGAAAUUUGAACACACUGAAGGAAGUCAGCCUUCCCACCUGAAGAUCAACAUGCCUGGCACUCUAGCACUUGAGGAUAGCUGAAUGAAUGUGUCUUACCCAUUUCCAUGUUUCUCUUGCUAAUUUCUUUCGUGUGUGCCUUUGCCUCAUUUUCUCUUUUUGUUCACAAGAGUGGUCUGUGUCUUGUCUUAGACAUAUCUCUCAUUUUUCAUUUUGU

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-89.6 kcal/mol
Ensemble Metrics
Free Energy: -97.94
Frequency: 0.0000
Diversity: 102.99
Structure Visualization
Structure Prediction
MFE Structure Prediction
...........(((((((((......)))..((((((((((((((....))).)).))))))).))(((((((((((((.(((.............................))).))).))))))))))..........................(((..(((.(((((.(((((((...((.(((.....))).))...)))))))...))))))))..)))..((((((......((..(((((....((((..(((((((((.....(((((((.............))))))).....))))..)))))..)))))))))...))...))))))....((((....)))))))))).(((((((......)))))))....................
Thermodynamic Ensemble Prediction
...........{(((({(((......)))..((((((((((((((....))).))}})))))).))((((((((((,({.(((..........................,..))).,}).))))))))))......................,|,{({(.,(((,(((((.{{{{{{{,..((.(((,...,))).}|,,,|}|||||,{,|}}|||||,.,,,..}|||,.......({..(((({....((({..((((({(((.{,..((((({(.......,,....))))))),}}..)))}.,))))),,)))))))})...)),......}}},,,,|||....,}}})))))}.(((((((......)))))))....................
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