Sequence Details

BLAST PRIMER
Symbol
lnc-ATP6V1C1-10:2
Sequence Length
214 nt
GC Content
0.3785
GCUCUCUCCAUGUCGUAAGUUACACAAGAAGAAGCUCUGAGGAGUGAAUCCACAAUACAGUUCAAAGAGAGAUUUAAAUUGCUAAUUUCCCGGCACUGGAAUGUGGGGAAAGAUUGUCACAGAUUUAGCAUGAAAGCCAUGUAUUUAACAUUCCUAUGUAAUAACCCUCUCUUAAAUUGCAUUUUGGUUUGAGAAACAGCAAGAACAAAUUCAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-41.6 kcal/mol
Ensemble Metrics
Free Energy: -46.18
Frequency: 0.0006
Diversity: 48.44
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((.((((..(((.(((...)))))).......((((....))))(((.(((.(((.(((((..(((((((...((((((((...((((((.(((......))).))))))....))....))))))(((((.....))))).....((((....)))).......))))))).))))).))).))))))))))...)))..............
Thermodynamic Ensemble Prediction
(((.(((,{.(((.(((...}))))).}.}}}}||,({{,,||}|,,,.{|{.{({.(((((..(((((((...({{{{(({...((((((.(((......))).)))))).,,,},....})))}}(((((.....))))).....((((....)))).......))))))).))))).}}}.})},}}}}}}...,})..|,......,}..
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