Sequence Details

BLAST PRIMER
Symbol
lnc-BASP1-10:1
Sequence Length
340 nt
GC Content
0.4853
GGGUGUGAGGGCGAUCUGGCUGUGACAUCUGUCACCCCAUCGAUCGCUAGAGUUGAUUCUGCUGAUCUGGCUGGCUAGGCGGGUGUCCCCUUCCUCUGUUACCACUCCACCUGCGUCCCUCCCGAAGCUGCGUGCUCAGUCAAAGAGGAUGACCAUCCCUGAUAGAGGAGGACUGGUCUUUGGUCAAGGGCAUAUGAGUAGCUGCGCUCCCCUGCUAGAACCUCCAAACAAGCUCUCAAGAAACAAAAAACCUAUUUCUGAUUAUGUCAGAGUGUUUUAGCUUUUCAGGGAAAAGUGAAUACUCAAUAAACAGAUAAAGUAGGCUAUGUCGUUAUUAUUU

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-95.3 kcal/mol
Ensemble Metrics
Free Energy: -102.44
Frequency: 0.0000
Diversity: 124.94
Structure Visualization
Structure Prediction
MFE Structure Prediction
.....(((((((....(((....((((((((((...((((((((((.((((......)))).))))).)).)))...))))))))))..((((((((((((..........((.(((((((.....((((......))))....))))..)))))....))))))))))))...(((.((((((..((((.....((((......))))))))))))))))).))).....)))))))............((((((((((.((((....((((((((..(((((((...))))))))))))))).)))).))))...)))))).................
Thermodynamic Ensemble Prediction
{((((.((((({(((,{((..(,((({{{{|||,}.|||,,|||||||(((,....,)))),,)))),||.|||,.,||}|||}}}}.,|..}}|,.}}},}}.}}}))))}..(,((((.(((((((({.{(.(((.,{{..{{,(({{....}))}}),,,.}}})))}}}})).))))))...})))}...{(((((....({{{.(({{(((((((((({...{{{.,.,,||,,((({.........,.|})}}|}.,.}}}..))).)))))))|....,}))),..))))..)))))}||||,|,||{{.||..,,}}.})))}},.,,....
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