Sequence Details

BLAST PRIMER
Symbol
lnc-BASP1-12:1
Sequence Length
252 nt
GC Content
0.5754
UGCACCUGCCCCAUGCCCAUCUCCACACCCCACCUGCGCUUGUGCUCCCAGCGCUCUCCACCAGGAAUCCCUUCCUCUCCCAUCCCAAGUCCUGCCAUAUUGCAAGGCCAGCUCAAGGUCCACACCCCUCCACCUUGCAUCCUCCCCCCCGACCCCCGUCAUCCCAGUCACAUCAGUCUACCUGCCUUGGCACCUGGAAUACUACUUCCUGAUUAUCACAAGACUUGCUGUGCUACCUUUUGUGGUCAUUUC

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-43.7 kcal/mol
Ensemble Metrics
Free Energy: -48.38
Frequency: 0.0005
Diversity: 45.32
Structure Visualization
Structure Prediction
MFE Structure Prediction
.((....)).............(((((........((((..(((((...)))))........(((((....))))).........((((((.((......(((((((.........(((....)))......)))))))...........(((....)))......((((...(((.....)))...))))....((((......)))).........)).))))))..)))).......))))).......
Thermodynamic Ensemble Prediction
.((,...,,.....,,......(((((........((((,.(,{,,...)))))........(((({....})))).........((((((.((..,...(((((((...,....,(({....,}}......)))))))...........(((....)))......({((...(((.....)))...))))....((((......)))).|....,..}}.))))))..)))}.......))))).......
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