Sequence Details

BLAST PRIMER
Symbol
lnc-BASP1-19:1
Sequence Length
378 nt
GC Content
0.3942
GAUGGCACCAUGGGAUCACUCAUGAAUUUUAGGAUAAUCAAAAGGAGGCCCAAGAAGUUAGUCCAUCACCAGUCAGUCACUAUGUCAAAACUAAGUACUAAGCACUAAUAACAGAUACAGAGAUAGUUAAAAGGCCAGAUAUUAAUGACCAACAUUAACUAUGGAAACAACAAGAAAACAAAGCAAAUGUUGCCCAGUGGCUUUUGGAAUUACAUGGUACACAAUAUGAAGGAACUGAAAAUGCUGGCCAUGGGCAACUAAUAUGCUACCAUUGCUGACAUUUCUUCUGGUAACCACAAAGGCAUGAGGGGAAGAAUUACACCACUAACCAUCAGAAGCUCUAACACGGAAGCCAGACAACAAACAAGAGAAAAUCAA

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-71.4 kcal/mol
Ensemble Metrics
Free Energy: -77.71
Frequency: 0.0000
Diversity: 66.78
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((.((((((((....))))))((((((.((....((.....))..))...)))))).)))))))....((((((.(((((.((.................................)).))))).......(((....((((((.....))))))...))).................((((...((((((((.((((((((((..((.((((........)))).))...)))))......))))))))))))).....))))......)))))).(((((((((((..((....((((.(((.((..((..........))..)).)))...)).)).....))..)))))).........))))).......
Thermodynamic Ensemble Prediction
(((((.((((((((....}})))){{(({{.{{....||....,)}..})},.)},}},.)})))))....((((((.{((,(,((.......,{{.......,,,.......},,,..),.|||||{{,..{{,((....,,,,||.}}..,,))))}}})|,.................((((.,.((((((({.((((((((((..{{.((((........)))).}}...)))))......)))))))))))))...,.))))......)))))).{((((((((((..((....{(((.(((.((..((..........))..)).)))...)),}}.....))..)))))).........,}))),......
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