Sequence Details

BLAST PRIMER
Symbol
lnc-BMP6-106:119
Sequence Length
484 nt
GC Content
0.3719
AUGGGGGUGGAACUCAUGAUGGAAUUGGAGCCUUUACAAGGGAAUGAAGAGACAAGAGCUCUCUUUAUGCCACGUGAGGAUACAGCAAGGCCCCAAUCUGCAAGCCAGGAAGAGUCGUCACGAGAACCAGACCAUGCAGGAACUCUGAUCGUGGACAUUUCAACCUCCAGAACUGUGAUCCAAAAUGCAUAUGUAUCUUUGGAAGAAACUCUGAAGUAAAGGCCGGAAUAUUCUUUGUUUAAAACAUUAAAAACAAAACAGACCAAAGCAUCAAGCAAGAAGUUUCCUGGCAAUAAACUAAGCACAGCAUUAUUUUUUAAGGAACACAAAUUAAGUGUUCAACCUGUGGCAAAUUUGUACUUUCUCCCUGAAUUAUGUUGUUAUCAAAGAAAAAAAUUGGGAAGCAUGGCAAAAUAUCAUCAAAACUGAAACUAGAAUUAAACAAAACUAAAUUAAAAUGAAAUAAAAUGAUGUCCAUUCUUAA

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-98.3 kcal/mol
Ensemble Metrics
Free Energy: -109.19
Frequency: 0.0000
Diversity: 129.71
Structure Visualization
Structure Prediction
MFE Structure Prediction
.((((((((((..((((((((...((((.((((((((...((.((((((((((....).))))))))).)).(((((.(((.(..(..(((............)))..)..).))).))))).....((((((((((((.....)))..)))))(((.(((........))).)))..((((((((((....)))).))))))......))))..))))))))..........(((((((..........))))))).....))))..))))..((.....(((((((((.............(((((((.((((....(((((.(((((((...((((........)))))))))))..)))))....)))).)))))))...............)))))))))...)).........(((....)))......................................))))..)))))))))).
Thermodynamic Ensemble Prediction
.((((((((((.,(((({{(({.,(({(.((((((((..,((.{(((((((({....}.))))))))).)).{{{|{.{{{.,..{..|||.,|,,,.,,...}}},.|..|.}|}.}||||,....,,{,(({{{{{||...}))).,)))))||,.|||......{{||..,,|..((((((((((....)))).))))))..,...))))..}}}}}}|||{{{,..{||(((((((..........,}}}}},..........{|.,...}},,}}},{}}|||||}..........,{((((,,,.,,,,....,,((((((.......))))))...}}}})}},..|||||...,,||{{{.,,,|.,,,|||,...,,,,........,,)))),},..,)),,,...,}}||,....||,...,,,................................)))).,)))))))))).
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