Sequence Details

BLAST PRIMER
Symbol
lnc-EPCAM-8:3
Sequence Length
201 nt
GC Content
0.5274
AGGCCGGGCGCGGUGGCUCACGCCUGUAAUCCCAGCUCUCAGGGAGGCUAAGAGGCGGGAGGAUAGCUUGAGCCCAGGAGUUCGAGACCUGCCUGGGCAAUAUAGCGAGACCCCGUUCUCCAGAAAAAGGAAAAAAAAAAACAAAAGACAAAAAAAAAAUAAGCGUAACUUCCCUCAAAGCAACAACCCCCCCCCCCCUUU

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-53.3 kcal/mol
Ensemble Metrics
Free Energy: -57.81
Frequency: 0.0007
Diversity: 48.88
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((..(((.(.((((((....)))..........(((...(((((((......((((((.(..(.(((...(((((((((........)).))))))).....))).)..))))))).(((.......))).....................................)))))))...)))....))).).)))..)))..
Thermodynamic Ensemble Prediction
,((..(((.(.((((((....|||,....{{{{.,,,...,||||{{,,..,||||((({({.{.((({,.(((((((((........)).))))))).....|||{...,,,)))}.(((.......)))............................,}}}}.,,.)))))),...}))....})),)}))}..)},..
Back