Forensic RNA Knowledge Base

Sequence Details

Symbol

lnc-ERICH1-1:1

Sequence Length

446 nt

GC Content

0.5807

GAACCUCACCGUCCACUUCCACCUAUGGGGCAUCCGCCACUCCCUCUCUCCUAUGCCCAGUCCUCUUCCCAGGCGCCCUGAACUCAGCCAUUACCCAGGCUGGCACCGCCUCCCACACUGAUCUCAAAGGUCUUCCCGGCCACCGACGUGGACCAUCACUCCUACACUGAUCUCAAAGGUCUUCCGAGCCACCGACGUGGACUAUCAGACUCACACACUGAUCUCAAAGGUCUUCCCGGCCACAGACAUGGACCAUCACUCCCACACUGAUCUCAAAGGUCUUGCCGGCCACCGACGUGGACCAUCACUCCACACACUGAUCUCAAAGGUCUUCCCGGCCACCGAUGUGGACCAUCACUCCACACUGAUCUCAAAGGUCUUCCCGGCCACCGACGUGGGCCAUCACUCCCACACUGAUCUCAAAGGUCUUGCCAGCCACCAAUGUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-107.7 kcal/mol

Ensemble Metrics

Free Energy: -116.47

Frequency: 0.0000

Diversity: 94.42

Structure Visualization

Structure Prediction

MFE Structure Prediction

.............(((...........((((((...................)))))).............(((............)))........((((((((..((((........((((....(((.......((((((....)))).))......))).....)))).....(((((....((((((....)))).))...)))))........(((((...)))))...(((((...((((...((..((((.........)))).))....)))).)))))........(((((.......))))).....(((((...))))).....((((.....((((((.......))))))..(((((...))))).....))))......(((((........)))))...........))))..))))))))......)))

Thermodynamic Ensemble Prediction

..........,..,.....,,....,|(((({{..,................}}))}}.,..........,|||,..|||....,,}.,........((((((((..((((........((((,...|||||.....((((((....)))).))......,,,.....||||.....(((({....((((((....)))).))...})))}.......,||||,...,||||...(((((...((((..,({..((({.........)))).}}....)))).)))))...,.,..(((((.......))))).....({{{{...}||||....,||||.,,|.((((((.......))))))..{{{{{...}||}}....,}}}}.,,,..(((((........)))))...}}},....))))..))))))))......)}}