Sequence Details

BLAST PRIMER
Symbol
lnc-KHDRBS3-4:5
Sequence Length
251 nt
GC Content
0.5060
GUCAAAAUCAGUAUGAAAGACUGCAGCAUGCUGAGUGAGCUUUCCGUUCUCGCUGAGAUGCAAUGCAGGGUCCACCCUCUGCAGGCCACAAUUUUGCCUGGAGGCAAAGCAUUCAGUCUUUCCAUUGGCCUGACAAUUUGAGCCAAGCUUUGAGGCCAACAGACAAAAUGCACUAGCAACUGGAGAGGGCCUGCCUGGUGGCCCUCCCUGUGAGAAGGUAUUCUUCCUGCUCCAUUGACAUCAGGCUUAUU

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-85 kcal/mol
Ensemble Metrics
Free Energy: -89.29
Frequency: 0.0009
Diversity: 70.22
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((.........(((((((((..((((.((.((((((.........)))))).))))))(((((((((....))))((.(((((.........))))).)).....))))))))))))))..(((((((.(......((((...))))).))))))).........(((....)))((.((.(((((((........))))))))).))(((.(((.......))).)))..)))))............
Thermodynamic Ensemble Prediction
(((({...,{{{,.({{{({{((..((((.((.((((((.........)))))).))))))..{({((((....||)}|||(((({......,{{|||,,.,)}}}},|||||}}||||}}}..{((((((.{......((((...))))).))))))).,,,,..,,|||....))},{.((.(((((((........))))))))),|,(((.{((......,))).))),,)))))............
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