Sequence Details

BLAST PRIMER
Symbol
lnc-NCAM2-16:1
Sequence Length
442 nt
GC Content
0.3416
AUGGCUGUCCCAGGUUGCAACAAAGACAGUGUCAGAAAAGACUGUAAAAAAUGUGGCUACCCUUGUCACCUUACUUUUGAAUGCCGCAAUUUUCUCUGAGUAGACCCUAAAAGGGACAUAGUUUUGGAUGUCAGCAGUACAAGUAGUGAAGAUAGAGAUGAAGAGAAUGAAGAACUGAAUAAAUUGCAGGCAUUACAGGAAAAAAGAAUAAAUGAAGAAGAGGAAAAGAAAAAAGAAAAAAUCAAAUUGAAAAAAAAGAAAAAGGUCUUAUCCAGUUCCACUGAAGAGGACACUUCAAAACAAAAGAAACGAAGAUAUCAGAAGAAAGAAAAGAAAAAAAGAGUAAAUCAAUAAAGGGAAACAUCACAAAAAGGAAAGAACAAGGAGAGAAAAAAAAAAGCAUUCUUCUACCCCUAAAAGUUCUGAAUUCUCCAGAAAGUAA

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-65.9 kcal/mol
Ensemble Metrics
Free Energy: -74.84
Frequency: 0.0000
Diversity: 119.03
Structure Visualization
Structure Prediction
MFE Structure Prediction
....((.(((..(((((((......(((((.(......).)))))......))))))).(((((......((((((((...........((((((((((.....((((...))))......(((((((((((.(((((.....((((..........................)))).....))))).)))))).)))))................(((..(((.((((............(((...)))...............)))).)))..)))...(((((......)))))....................)))).))))))..........)))))))).......)))))..............))).))....((((((...............))))))...........(((((.......))))).....
Thermodynamic Ensemble Prediction
.,{{{(,((,,.((({((,.,....(((((.(......}.)))))......})}|)),.{{(((,,,...(({(((((,{{{{{{{{{{((((((((,,,{...((((...)))).|....{{{{{,,((((.,((,(,....||,|}..,}},....,..,,},,,......}}}}...,}))))).)))))).))}},................{{{..{{{.{{{{............{{....,,,..............,||||.}}|,,|}}.,,||{{{,}},,.}}}|,.............,..,...|}}},,},,,,..........,}}}}}},.......,}))).....,,.......{|{.{{{{{.(((,(((({...........}),)))).}.)))....}}|||,..,},}.}}},......
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