Sequence Details

BLAST PRIMER
Symbol
lnc-NCAM2-18:2
Sequence Length
217 nt
GC Content
0.3410
UUCCCAACAUGAGGCAUAUGAAAUGUGAAAAAAUAAAAAAGCCUCUAUUUGAAUGGAUUGAAGAGGAAACAGUGUGUUUAUUUAAAAGUCACUAGAAAAAAGAACAACUUGUAAGACUGAUGCUCUGAGAAACGUACAUGUUAAACACUGACCAAGAAAAAUAGUGGCAAGUGGUGAAGUUGAUUUAGUCUUGAUGUUUUCUUGCAGAACAGAGAGA

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-32.7 kcal/mol
Ensemble Metrics
Free Energy: -38.1
Frequency: 0.0002
Diversity: 64.94
Structure Visualization
Structure Prediction
MFE Structure Prediction
....((((..(((((.........................)))))....((.(((..((..((((.(..((((...(((((.......((...........)).......))))))))).).))))..))..))).)).......((((..(((..........)))..)))).....))))......((((..((((((.....))))))..))))
Thermodynamic Ensemble Prediction
....(((,..(((((........,.,......,,......)))))...}||.,{{,.((,.,((({{{{(((({{{(({.,,...,,,,|}},......,.|..,..},,.{{{{||||{,.|,||..,,,,|}}.}.,}}}...((((..(((.......,..))),.))))....,},,)..}}}}||||,.||||||}}}.,))},))..}}},
Back