Sequence Details

BLAST PRIMER
Symbol
lnc-PRR20C-7:2
Sequence Length
221 nt
GC Content
0.3575
CUUUUUUCAUUUUUUUUGAUAGGCCUUGGGCUCGCCUAGAUCAUGAAAAUCAGAAUCUAUGGUUUACCUUUAUUAGGAAACACUUGGAAGGCAAAAGGAGGUUUAUAGAACUGUAGCAUGGAUGAAAUAAGUAAUACAGUGAAUGCUGUCUAAGACUUCUGUAAAAAAAAAUAUAUUUCAGCCUUGACAAAAGACCCUGAAGCUGCCUAAGUGAACUUGAC

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-45.5 kcal/mol
Ensemble Metrics
Free Energy: -48.65
Frequency: 0.0061
Diversity: 35.73
Structure Visualization
Structure Prediction
MFE Structure Prediction
...........(((((((((((.....(((...((((((((..(((...)))..))))).)))...))))))))))))))(((((((..(((....((((((((.((((....((((((...((............))....))))))))))))))))))................(((((.(((.....)))...))))))))..)))))))........
Thermodynamic Ensemble Prediction
...........{(((((((((({,,..{{|,..((((((((..(((...)))..))))).)))...}}}})))))))))}(((((((..(((....((((((((.((((.,..((((((...(,..........,.}},,..))))))))))))))))))................(((((.(((.....)))...))))))))..)))))))........
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