Sequence Details

BLAST PRIMER
Symbol
lnc-SGCE-1:1
Sequence Length
352 nt
GC Content
0.3864
CCUGGACCUAGAAACAAAAAAUGAAAGUGGAGAAAACCAAACAAGAAUCUUUCUUUCUUAAAGUAAACAUCGGACUGACAUCUCCUUUCAAACAUUCAUUGAGGAUCUACUCUGUGAGAAGAAGCAAUACCAUGUUAUCUCAUUCUAGUUCCAGUUCUAGUUGACUUGAUUGUCAAACGACUGCUAAGAAGGUGAAAUAGAGGAGAUGACAUGAAUGAGGGACUACAUUGGAAUGAAGAAGAACCUGGAGGAGGUAAAAAAACUGAAGGCUCCGGAUGUCGGACGAUGGAAAAUAAAAACAACAAGCAAGUGAAACUCCCUGACUUAUCAACCUUACUCAAGAAUUCCUUCU

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-73.4 kcal/mol
Ensemble Metrics
Free Energy: -80.73
Frequency: 0.0000
Diversity: 68.19
Structure Visualization
Structure Prediction
MFE Structure Prediction
...(((...............(((((((((((..........(((((.......)))))........(((((..(((((((((............((((.(((......))).)))).............(((((((((((.(((((.(((...(((((((((((......)))).......))).))))...))).))))))))))))))))....(((..((.(.((......))).))..)))((((..(((......))).....))))))))))))).)))))...........................))))...)))).)))...............)))....
Thermodynamic Ensemble Prediction
...(((..,.,..........,((((({((((....,.....,{{{,.,,,,},))}}}...,,...(((((..(((((((((,{{{{,.....,((((.(((......))).))))}..,.........(((((((((((.(((((.{((,..(((((((((((......)))),...,,,)}}.,)))...))}.))))))))))))))))....{({..((.{,{{.....,,,,.}}..))}((((..(((......})).....))))))))))))).)))))....................,||....}}}}.,.}))).,,,...,,..}..}}...)))....
Back