Sequence Details

BLAST PRIMER
Symbol
lnc-SLC39A11-10:24
Sequence Length
340 nt
GC Content
0.4706
AAUUUCUUAAAAUCUUGUUUUCUCUCGUUGUCUUCGGAAGAAGCCCGACAUUUCUUAUAGGAAAUGGAACUCUUCAUAAGGUCGCCCCGACCCCUCCUCCCUGACCUGGGAAGACGCGCGCAGUCCCCGACCAGAGGACCUCAGACACAGGUGAAAACCAUCCAUUUCUUGGAGAAGUGCCACGGUGGGGUUGCAAGUCCCAGGAUCAAGUUUUCGAUGUGUCUCUUUUUCCCGUAAAGUGGCUGAAAUCUGAAGCUGAAUCUGCAAGUGUCAUGGAGUCAUUGAAUCUCACAGUCUCAACUGAUAAAAGUUAUUAAAGGUCGUCUGGUUCAGCCUUCUA

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-89.4 kcal/mol
Ensemble Metrics
Free Energy: -94.6
Frequency: 0.0002
Diversity: 64.03
Structure Visualization
Structure Prediction
MFE Structure Prediction
.......................((((((((((((((.......))))(((((((....))))))).............(((((...))))).....((((......))))))))).))).)).....(((((((.(((((.(((((((..(((((((........((((((.((..(((.((......)).)))..))))))))....))))))).))))))).............(((((((...(((...((.(((..(((..((..(((((....)).)))..))..)))..))).)))))...)))))))..))))).)))))))..........
Thermodynamic Ensemble Prediction
.....................,,{.((({(((({{{(,.{,,,.,},,(((((((....))))))).....}}))....(((((...))))).....{(((......))))))))),),).}}.....(((((((.(((((.(((((((..(((((((........((((((.((..(((.((......)).)))..))))))))....))))))).))))))).,,,.......,,||{((((...{{{...||}|((..(((..((..((({{....)},}))..))..)))..))|,||}}}...))))}},..))))).)))))))..........
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