Forensic RNA Knowledge Base

Sequence Details

Symbol

lnc-SLC39A11-10:4

Sequence Length

298 nt

GC Content

0.4933

CCUUGGGGUUGAUGGGACUGGUGGGGCCGUUGCUAUUGUUCCCCCGCAGAGUAUCUGCCAAACCAAAUGGGAGAAACUCAGAGAAAGCCAGGGCCUGGUAUCCAGGGGCUCCAGCUUGGUCAUUGCUCAAAAGCCUCCUUUUGAAUGUCCACUCUUAAGGAAGCCAAGUGGGAAGAUCCUUGCUGGUUUCUCCCUCUGAGGAAGAAGGAAAAUGCCAUGACUCCCACUAUGGCCUCUCUUGGAACCAUAUUUUGAGGAUCUGGGAGAAUACAGCAACUUAAUACACCAAUGAAUUCAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-93.4 kcal/mol

Ensemble Metrics

Free Energy: -98.62

Frequency: 0.0002

Diversity: 104.62

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((.((.....(((((.....((((((..(((((.(((...((((.(((.(((.......))).))).)))).......(((....(((((...))))))))(((.(((((((....(((....))).(((((..((........))..))))).))))))).)))(((((((((.((((((((((.(((.....))).)))....((((((........)))))).......))))))).....)))))))))))).))))).))))))......))))))).)))))..

Thermodynamic Ensemble Prediction

..,,,({(({,{,,,,.,(((((,{,..{{{(({..{||{{}||||}.((((.(((.(((.......))).))).)))).({,.{(((..((((((((...))},)))))},.))}|((,{{{...(((((((....)))))))}}}.}}..}},.,,|||.((({{((((({,{.{{,,,,,{{{{||,(((.(((.....))).))}....||||,|},}}}}}}),)))).||{||||{{.{{......,},)).)))))),))}},,)))}}),.....)})))},....,,..