Forensic RNA Knowledge Base

Sequence Details

Symbol

lnc-TM4SF20-1:1

Sequence Length

241 nt

GC Content

0.4647

GGACGCGUGGCCCACGCACUGGAACGGCUCCACGUCCUGCAGACACAUUCUGGGACUGCACCUUAUGAGUGCUGCUCACUCUGUUUCCUGCAGAAGACAUACAGAGCCGUUCGCAUAGAGUAGGGCCAUGAUUUUGAUUCAGCAAUUCUUCAAACCACUGAUGCUGGUUGACCAUUUGACUUUGUUUUUGAAGUAUUUUUUACAUACAGUGUACAGAACAUUUCCGCUGGAUAUUUGGAUA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-73.4 kcal/mol

Ensemble Metrics

Free Energy: -77.73

Frequency: 0.0009

Diversity: 34.98

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((((((((.(..(((((((((((...((((((((((.(((...((((.(.(((((....).)))).)))))...))).).))))))..))).....))))))))).))..).)).))))))))......(((((((..............(((((((((..((........((((((....))))))........))..)))))).))).........))))))).........

Thermodynamic Ensemble Prediction

.....((((((((((.{..(((((((((((...((((((((({.(((...((((.(.(((((....).)))).)))))...))).}.))))))..))).....))))))))).))..}.)).))))))))..||..(((((((......{{,{{((((....|.})))}}}.......{{,{{{....,|||||.,{{{.{{||{.,,))))}.))}}.,,,,,.))))))).........