Basic Information
Symbol
FABP6
RNA Class
mRNA
Alias
fatty acid binding protein 6
I-15P
ILLBP
I-BAP
ILBP3
I-BABP
ILBP
I-BALB
illeal lipid-binding protein
ileal bile acid binding protein
gastrotropin
fatty acid binding protein 6, ileal
GT
ileal lipid-binding protein
intestinal 15 kDa protein
Gastrotropin
Fatty acid-binding protein 6
Ileal lipid-binding protein
Intestinal 15 kDa protein
Intestinal bile acid-binding protein
Location (GRCh38)
5:160187363-160238735
UCSC Genome Browser
Transcripts
Secondary Structure
MANE Select
NM_001445.3
Sequence length
496 nt
GC Content
0.5524
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-163.3 kcal/mol
Thermodynamic ensemble
Free Energy:
-172.17 kcal/mol
Frequency:
0.0000
Diversity:
103.5
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
...........((((..(((.(((((.(..(((((((..((((((((....(.((((((((...(((...(((((..((((((..(((.((..((((((.....))))))..)).)))....)))))).........)))))...))).(((.((((...........)))).)))....((((((((.(((((......)))))..)).))).)))))))))))..((.((.((((((.......)))))))).)).............)....))))))))..)).......)))))..).))))).)))(((((((...(((((((((............)))))))))..((((....((((((((.((...(((((((.((...)).)))))))....)).)))))))).....)))).......(((((.......))))).))).)))).(((.........)))..................))))..
Thermodynamic Ensemble Prediction
..,,,{..{{((((({.(((.(((((.(..(((((({..((((((((...,,,((((((((..,{{{...,((({..((((((.,(((.((..((((((.....))))))..)).)))....)))))).},,.....))),,..((((((({.((((..{,...,,..}))),)))....((((((((.(((((......)))))..)).))).))).,)))))...{{.((.((((((.,....,)))))))).}))))))..,,,.,.,....))))))))..},......})))))..).))))).)))|||,|||,,.(((((((((............}))))))))..{((({.,.{{((((((.,,..{((((((({.{..|}),)),,,}},}|}}}.}))},}}},|.|.}},)}......(((((.......))))).|||.,},,.|||,}},....,)))}}........,},,....,))...
Transcripts
| ID | Sequence | Length | GC Content |
|---|---|---|---|
| NM_001040442.1 | CAUUGCAGACUUUGCACCUCUGGCUCCAGGGAGCUCACAGGCAGGGGCU… | 672 nt | 0.5446 |
| NM_001130958.2 | GAUUACUUUGAAGGGACUAGAAGGAGGACACAGGGUCCUGGAGGAAGGC… | 723 nt | 0.5477 |
| NM_001445.3 | ACCACCCAUUCUCCUCAUCCCUCUGCUCUCUGGCCUCCAGCCUCCCAGC… | 496 nt | 0.5524 |
Summary
This gene encodes the ileal fatty acid binding protein. Fatty acid binding proteins are a family of small, highly conserved, cytoplasmic proteins that bind long-chain fatty acids and other hydrophobic ligands. FABP6 and FABP1 (the liver fatty acid binding protein) are also able to bind bile acids. It is thought that FABPs roles include fatty acid uptake, transport, and metabolism. Transcript variants generated by alternate transcription promoters and/or alternate splicing have been found for this gene. [provided by RefSeq, Jul 2008]
Forensic Context
No forensic context available.
Genomic Tracks
