Basic Information
Symbol
FDCSP
RNA Class
mRNA
Alias
follicular dendritic cell secreted protein
FDC-SP
chromosome 4 open reading frame 7
C4orf7
follicular dendritic cell secreted peptide
FDC secreted protein
Follicular dendritic cell secreted peptide
Location (GRCh38)
4:70226124-70235252
UCSC Genome Browser
Transcripts
Secondary Structure
MANE Select
NM_152997.4
Sequence length
513 nt
GC Content
0.3860
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-92.3 kcal/mol
Thermodynamic ensemble
Free Energy:
-105.05 kcal/mol
Frequency:
0.0000
Diversity:
114.38
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
............((((((.((((((((((((.(((..((((((..((..(.(......).)..))..)))))).))))))))(((.((((...)))).))))))))))..((((..((((....))))..)))).))))))(((((((.((((.((((((.(((.......((((((((......(((......))).........................((((((.(((((..((....(((.((((((..(((..(((((((((((........)))).................(((....((.....))....))).)))))))...))).)))))))))....))))))).).)))))........)))))))).......))).))))))....................(((((..(((.............))).)))))........))))))))))).........((((.((((...)))).))))..............
Thermodynamic Ensemble Prediction
.,..,,,,,...((((((.((((((((((((.(((..((((((..((..,.(......).,..))..)))))).))))))))(((.((((...}))).)))))))))){,((((..((((....))))..))))})))))}{{{{{{{,{{{{,(({{{(,(({,......{{{{((((......{,{..,....,,...........,,},..........((((({.(((((..{(....(((.((((((..(((..(((((((.{{{........},,|,,,...............,.....}|},...)),....,}.)))))))...))).)))))))))....})))))).)})}))).,......}}}}))))..,,,,.|||,}||||.....,,{,...,,.,,.{,.,{{({..,.({.....}},,,..,,}.}}}}}..,.}},,))))))))))).........{{{{.{{{,.,.}))),))))..............
Transcripts
| ID | Sequence | Length | GC Content |
|---|---|---|---|
| NM_152997.4 | AGUCACUUGCCAUUUCUCAUAACAGCGUCAGAGAGAAAGAACUGACUGA… | 513 nt | 0.3860 |
Summary
This gene encodes a small secreted protein that is expressed in follicular dendritic cells. This protein specifically binds to activated B cells, and functions as a regulator of antibody responses. It is also thought to contribute to tumor metastases by promoting cancer cell migration and invasion. [provided by RefSeq, Dec 2011]
Forensic Context
No forensic context available.
Genomic Tracks
