Basic Information
Symbol
HTN1
RNA Class
mRNA
Alias
histatin 1
HIS1
Hst1
histatin-1
PPB
histidine-rich protein 1
post-PB protein
Histatin-1
Histidine-rich protein 1
Post-PB protein
Location (GRCh38)
4:70050438-70058848
UCSC Genome Browser
Transcripts
Secondary Structure
MANE Select
NM_002159.4
Sequence length
547 nt
GC Content
0.3419
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-115 kcal/mol
Thermodynamic ensemble
Free Energy:
-124.06 kcal/mol
Frequency:
0.0000
Diversity:
78.99
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
..(((..(((((..((...((((((..((((.(((((.((((.......))))..))))).))))....((((((.(((((((.((..((..(((((....(((.(((((.....)))))..))))))))..))...)).))))))).)))))).....((((.......(((((((.(((..((((((.........((((((...))))))((((.((((..((((.((.....)).))))...)))).))))((((((((((.(((((....((((..(((.(((.(((......)))...))).))).))))....))))).))........((.(((.((((((.(((.......))).)))))).))))).............))))))))..))))))..))).)))))))........))))(((((((.....)))))))......(((........))).)))))).......))..))))).)))...((((((((.(((.((.......)).))).))))))))...........
Thermodynamic Ensemble Prediction
..,{(..(((((..((...((((({..((((.(((((.((((.......))))..))))).))))....((((((.(((((((.((..((..(((((....(((.(((((.....)))))..))))))))..}}.,.)).))))))).)))))).....((((.......(((((({.(((..((((((.........{(((((...)))))}((((.((((,.((((.((.....)).)))),,.}))).))))((((((((((.(((((.,..((((..{((.{((.{((......,})}.,})).},}.))))....))))).))........((.(((.((((((.(((.......))).)))))).))))).............)))))))}..))))))..))).}))))))....,,..}}})(((((((.....)))))))......{{{........}}}.}))))).......))..))))).))|{..((((((((.(((.((.......)).))).))))))))..,,.......
Transcripts
| ID | Sequence | Length | GC Content |
|---|---|---|---|
| NM_001368990.1 | AUCUCUUGAGACUUCACUUCAGCUUCACUGACUUCUUGACUCUCCUCUU… | 526 nt | 0.3384 |
| NM_002159.4 | AUCUCUUGAGACUUCACUUCAGCUUCACUGACUUCUUGACUCUCCUCUU… | 547 nt | 0.3419 |
Summary
This gene encodes a member of the histatin family of small, histidine-rich, cationic proteins. They function as antimicrobial peptides and are important components of the innate immune system. Histatins are found in saliva and exhibit antibacterial, antifungal activities and function in wound healing. [provided by RefSeq, Aug 2014]
Forensic Context
No forensic context available.
Genomic Tracks
