Basic Information

Symbol
MSMB
RNA Class
mRNA
Alias
microseminoprotein beta PSP-94 PSP57 PSP94 IGBF MSP MSPB PN44 PRPS PSP beta-microseminoprotein microseminoprotein, beta- HPC13 immunoglobulin binding factor prostate secreted seminal plasma protein prostate secretory protein of 94 amino acids seminal plasma beta-inhibin PRSP Beta-microseminoprotein Immunoglobulin-binding factor Prostate secreted seminal plasma protein Prostate secretory protein of 94 amino acids Seminal plasma beta-inhibin
Location (GRCh38)
10:46033307-46048180 UCSC Genome Browser
Transcripts
NM_002443.4
BLAST PRIMER
NM_138634.3
BLAST PRIMER
External Database
HGNC NCBI Ensembl UniProt OMIM GTEx

Secondary Structure

MANE Select
NM_002443.4
Sequence length
486 nt
GC Content
0.4403

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-125 kcal/mol
Thermodynamic ensemble
Free Energy: -134.16 kcal/mol
Frequency: 0.0000
Diversity: 163.99
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
......((((....((.(((((.((((((((((((..(((((....))))).)))))))))........(((((((.....((((.((((((...))).))).))))....)))))))..((((..((((((((..((.....))..))))))))...)))).....(((((.(((.(((.(.(((((((((((.(((..(((((((((......(((.((((((......))))..)).)))....)))))).)))..))).)))..............)))))).....(((((......))))))).).))).))).).))))...))).))))))).....))))((((((.......))))))...........(((((((.(((((((...((((...((((((((...........))))))))...((((((...))))))..)))).))))))).)).............)))))..
Thermodynamic Ensemble Prediction
.....,((((.,..({,(({{{.{{|{((((((((..(((((....))))).))))))))},{{((((((((((({.....((((,({{(({...})).}}},||}}....))))|||.{((((..((((((((..((.....))..))))))))...)))}.,...|.|||......,.}}}}}|||||((((.(((..((((((((({{....{((.,,{{{,..,...,}}).,))})))....)))))).}))..))).)))}..,.,..,}},..,|||}.,{{,,{((({...,,||}||}||||,.,}..|,,}|)))||{{||,.{||,||,.....,|,,((((((.......))))))....,,,..{{(((({...,,||||}}}.((((...,||||,||}}}..}}}}}}.}||||,,...{(((((...))))))}.}))).}}))),},|}....,}}})},}}},))}..

Transcripts

ID Sequence Length GC Content
NM_002443.4 GUACCUGUCUAUAAGGAGUCCUGCUUAUCACAAUGAAUGUUCUCCUGGG… 486 nt 0.4403
NM_138634.3 GUACCUGUCUAUAAGGAGUCCUGCUUAUCACAAUGAAUGUUCUCCUGGG… 380 nt 0.4421
Summary

The protein encoded by this gene is a member of the immunoglobulin binding factor family. It is synthesized by the epithelial cells of the prostate gland and secreted into the seminal plasma. This protein has inhibin-like activity. It may have a role as an autocrine paracrine factor in uterine, breast and other female reproductive tissues. The expression of the encoded protein is found to be decreased in prostate cancer. Two alternatively spliced transcript variants encoding different isoforms are described for this gene. The use of alternate polyadenylation sites has been found for this gene. [provided by RefSeq, Jul 2008]

Forensic Context

No forensic context available.

Genomic Tracks
Track Image