Basic Information
Symbol
NINJ2
RNA Class
mRNA
Alias
ninjurin 2
ninjurin-2
nerve injury-induced protein 2
Ninjurin-2
Nerve injury-induced protein 2
Location (GRCh38)
12:562852-663742
UCSC Genome Browser
Transcripts
Secondary Structure
MANE Select
NM_016533.6
Sequence length
918 nt
GC Content
0.5447
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-317.6 kcal/mol
Thermodynamic ensemble
Free Energy:
-333.12 kcal/mol
Frequency:
0.0000
Diversity:
338.72
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
...............(((...((((((((((((((((........((((...)))))))))).(((((((.((((((.((((.(((.(((.(((((.........(((((.((((((.(((((..(((((.......)))))....)))................(((((((.......).))))))....(((((((((((((((......)))))))))..).))))))).)))))))))))..((((((((((.....((...........((((...))))..........))....)))))))))).(((((.............))))).((((.......)))))))))((((.....)))).....((((((((.((.(((((((((((........((((..((.(((((((((....(((..((((...((((....))))..(((((((.((((......(((.(((((((.(((((((((((.....(((...))))))))...)))))).)))))))..)))..((((((((....((................))....))))))))(((((.....))))).)))).)))).))).....((((.((((...)))).))))..((((((((...((((...((((((.....))))))...))))...)))...)))))...........((((((.((.....))))))))((((((.(((((((..........))))))).))))))..))))..))).(((((....))))))))))))))..))...))))....)).))))))..))).))....))))))))))).))))))...).))))))...))))))).......(((((.......)))))...))))))))))..))).
Thermodynamic Ensemble Prediction
.,,{,,,..,,.{{,((({{.{(((((((((({(({({{,,.,..((((,,.}}}))))}}).({(((((.{{((((|{{((,{(((({{,{{,{{,.{,,....||||{.,{{{{,.{{{((,,(((((......,}||||{{{,|{{,....,||,.,{,,..((((((,.......},)))}||{{{,(((((((((((((({......}))))))))..)}}))))((((({.{(.{({(,,{((({((((.....,,,,,,........,{{,,,,})|}}}}}.}}.}}))}}.,}},{{||....))}))})}}|,.,|}}||,}}||}|{(||{{{{{,|}||}||}.{{{{,...,||||||,,.,|||||||,{|,,,,{{{|{{,{..,...,,||||,,{,.,,|||||||}.},|||}}|||,...{{((....)}}}...(((({{.||||......{{{.(((((((.(((((((((((.....(((...))))))))...)))))).))))))).,))).}||||||||....||,|,,,,.,.....,},)}.,,.)))})|||{((((,....}}}}}.)))},}))),}|},,,,.{{((.((({...)))),))))},|||||,{{,|,{||{,,.(({{((...,.}}})))...}))),,.))}...}}|}|,|||},.,,,}|{{{||||{,,,.,}}))))}}((((((.(((((((..........))))))).)))))){{|,||{.||,.(({,,...}),,)).))))))||||}}.,.|||}...,},.))))),..,))}),....,,}}}))})}}}))}))))),})))))}}...}}}}}}}.......{{(({.......}}))}...)))))))},,..,,,.
Transcripts
| ID | Sequence | Length | GC Content |
|---|---|---|---|
| NM_001294345.2 | AGUAAUUGCUUGGUGGGGCAAGAGGCUUCAGUUCCAAGUCAGCAAAUGG… | 871 nt | 0.5304 |
| NM_001294346.2 | GUUGCAAAGCAGCCGCUCGGUGGCCGUACAACGCUUCAUCUCUCCGAGC… | 926 nt | 0.5421 |
| NM_001367996.1 | GUUGCAAAGCAGCCGCUCGGUGGCCGUACAACGCUUCAUCUCUCCGAGC… | 1057 nt | 0.5402 |
| NM_016533.6 | AGAGACUCAGACGGCGGAGCCUGGAGGAGCCCACGCAGUCUGUUCCCGG… | 918 nt | 0.5447 |
Summary
The protein encoded by this gene belongs to the ninjurin (for nerve injury induced) family. It is a cell surface adhesion protein that is upregulated in Schwann cells surrounding the distal segment of injured nerve, and promotes neurite outgrowth, thus may have a role in nerve regeneration after nerve injury. [provided by RefSeq, Oct 2011]
Forensic Context
No forensic context available.
Genomic Tracks
