Basic Information
Symbol
PHGR1
RNA Class
mRNA
Alias
proline, histidine and glycine rich 1
proline/histidine/glycine-rich 1
proline, histidine and glycine-rich protein 1
proline-histidine-glycin-rich protein 1
Proline, histidine and glycine-rich protein 1
Location (GRCh38)
15:40351033-40356434
UCSC Genome Browser
Transcripts
Secondary Structure
MANE Select
NM_001145643.2
Sequence length
436 nt
GC Content
0.6261
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-176.5 kcal/mol
Thermodynamic ensemble
Free Energy:
-185.02 kcal/mol
Frequency:
0.0000
Diversity:
169.8
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((.....(((((((((...)).....((((.....)))).((((........)))).((((....))))..)))))))..((((....(((((((((((((........))))).))).(((((.....))))).((((((((((((((..((((((...........))))))))))))))..))))))...((((((((((((((((((((((..((((((...........))))))))))))))).(((.....))).)))))))).))))).......)))))))))...........((((((.((((((...((((.((......(((((..((...))..)))))....)).))))......((......))....))))))))))))........(((((...))))).....)))..........
Thermodynamic Ensemble Prediction
.,......,,,,,{,(({..{{{{{{{(((({....||||.(((({{{{{...,,||{(((({..{|||||.,|||||.{{((((..{{(((((({{(((((........|}}}}.))}{((({{.,,..|||||,|{{|||{(((((({,.{||||,.,,,,,,||..)))},}})}})))).,})))},...{{{||{{{|||{{|{((({(({|.((({{{.....,.,...))))}}})))))))),|||.....))},))))))))))}))).......,,,}},)))}},..}}..,.,|||||}||{|||...||||.,......,|{,{,}}||}}}))..,))),.)}),}.,,||{{{{(.(({{,...,,....,,,,,,,,,,,,........{{{{{...}))))}.}},})},.........
Transcripts
| ID | Sequence | Length | GC Content |
|---|---|---|---|
| NM_001145643.2 | AGACUUCCUGCCCCUGCUCUGCACUCUCAGGUAUUCCCUGCUCUUACUC… | 436 nt | 0.6261 |
Summary
No summary available.
Forensic Context
No forensic context available.
Genomic Tracks
