Basic Information
Symbol
PVALB
RNA Class
mRNA
Alias
parvalbumin
D22S749
parvalbumin alpha
Parvalbumin alpha
Location (GRCh38)
22:36800682-36819479
UCSC Genome Browser
Transcripts
Secondary Structure
MANE Select
NM_001315532.2
Sequence length
550 nt
GC Content
0.5055
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-146.5 kcal/mol
Thermodynamic ensemble
Free Energy:
-157 kcal/mol
Frequency:
0.0000
Diversity:
230.63
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
..(((((((((..(((.....))).))))((((((.....(((..((....))..)))..)))))).....((.((((((((.((((((.(((((((........(((........)))........)))).)))))))))....((((.(.(((.(((....((..((((((((....((.(((((.((.......((((...(((..((.(((.(((((((((....))))....))))).))))).)))))))....)))))))))...............(((...(((((((((((.......((((((((.(((........))).))...)))))))))))))))))...)))...))))))))..)).......))).))).)))))..(((..((........))..)))..)))))))).))((((.((((((...(((((........(((((((..........((((.....))))......)))))))........))))))))))).)))).)))))....(((...))).....
Thermodynamic Ensemble Prediction
..{{({(((,{{.{({,...,,{{.{{{((.((((...||||{,|,}|}|||||,,|||||.|,||..{{{((,(((,(((((,....|.|}}.}}.}||||}}|{{(({,.....{{((((({,.,|.(((.((((..........)).)).))).||(((((|......})))))},,{}|||{,}||}}....}|||{..,{{{,,||,|||.{{((((({{..,,}|||....,||||,|||||{},,}||{{{{.|||||||||....,.......,.,}}.||,|||{({.((.{.....(({((((..({{,,,{,{(({((.{{,{{,{{,.|{{,...{||||{.||..(({.,{.,||...,,,|}}..,}}))).,},,,,,.,..|||..{|....,,,.)},.))),,},,,,))),},,|||.|||,,..,}}||})},,}}}.,}||}}|},,,..,..}}||||,,,,.)))),,.,,.,,,)))}.,..,,.,))))....})}.))))}))),,...,|||},.,)),},..
Transcripts
| ID | Sequence | Length | GC Content |
|---|---|---|---|
| NM_001315532.2 | ACUUGCUCUGCCCGCUCAAACAGUUGCAGGAUGUCGAUGACAGACUUGC… | 550 nt | 0.5055 |
| NM_002854.3 | ACUUCCCGACAGGACUUCCCACCAGCCCAGCCUUUCAGUGCAGGCUCCA… | 596 nt | 0.5218 |
Summary
The protein encoded by this gene is a high affinity calcium ion-binding protein that is structurally and functionally similar to calmodulin and troponin C. The encoded protein is thought to be involved in muscle relaxation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2015]
Forensic Context
No forensic context available.
Genomic Tracks
