Forensic RNA Knowledge Base

Sequence Details

Symbol

NM_000200.3

Sequence Length

532 nt

GC Content

0.3571

AUCUCUUGAGACUUCACUUCAGCUUCACUGACUUCUGGAUUCUCCUCUUGAGUAAAAGGACUCAGCCAACUAUGAAGUUUUUUGUUUUUGCUUUAAUCUUGGCUCUCAUGCUUUCCAUGACUGGAGCUGAUUCACAUGCAAAGAGACAUCAUGGGUAUAAAAGAAAAUUCCAUGAAAAGCAUCAUUCACAUCGAGGCUAUAGAUCAAAUUAUCUGUAUGACAAUUGAUAUCUUCAGUAAUCACGGGGCAUGAUUAUGGAGGUUUGACUGGCAAAUUCGCUUUGGACUCGUGUAUUCUCAUUUGUCAUACCGCAUCACACUACCACUGCUUUUUGAAGAAUUAUCAUAAGGCAAUGCAGAAUAAAAGAAAUACCAUGAUUUAGUGAAUUCUGUGUUUCAGGAUACUUCCCUUCCUAAUUAUCAUUUGAUUAGAUACUUGCAAUUUAAAUGUUAAGCUGUUUUCACUGCUGUUUCUGAGUAAUAGAAAUUCAUUCCUCUCCAAAAGCAAUAAAAUUCAAGCACAUUAUUAUGUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-109.4 kcal/mol

Ensemble Metrics

Free Energy: -120.06

Frequency: 0.0000

Diversity: 186.05

Structure Visualization

Structure Prediction

MFE Structure Prediction

...(((((((((...((((((......((((.((((..((((.......))))...)))).)))).......))))))....(.(((((((.......((((((((((((.....)))))...))))))).......))))))).)..(((((((.............)))))))..(((.((.........)).)))..((((......))))(((((((((.(((...(((((.((((((.......)))))))))))((((((..(((......)))))))))..........))).)))))))))................((((((.(((.......))).))))))..(((((((..(..((((......))))..)..))))))))))))))))...........(((((((.....)))))))...((((.(((((...((((.(((.((....)).)))(((((((.....)))))))...............))))...)))))))))(((((....)))))

Thermodynamic Ensemble Prediction

....(((((({.,,,{..((((.,,..||||.,{{{|||,||}}...,,||||...}||)|))||.......|||}|||,,.{,{{(((((...,,,.{{((((((((((.....))))}..}))))))),,.....)))}}}}|}}.(((((((.............)))))))..{((.{{,,,,..,,,|},|}|{{((((......})))||{(({{{{,(((.,{(((({|{(((((.,.....}))))})})))||,{{,..{{{..,...|||,||||,,,|||,,,,.}}},|})))}}}}.{{{{...........((((({.(((.......))).})))))}))}||,,|,.,.}||||}}},}})},,.}}}})}||}))}}}}}||{{....,},....(((((((.....)))))))...,,,{{{.......|||,,||{,||....,.{|||,,|,,,{{{.,{|,||,.,}}))}.}}}......)))).....,})))))(((((....)))))