Forensic RNA Knowledge Base

Sequence Details

Symbol

NM_001145643.2

Sequence Length

436 nt

GC Content

0.6261

AGACUUCCUGCCCCUGCUCUGCACUCUCAGGUAUUCCCUGCUCUUACUCCAAAAAGAUGGACCCAGGUCCGAAGGGGCACUGCCACUGUGGGGGGCAUGGCCAUCCUCCAGGUCACUGCGGGCCACCCCCUGGCCAUGGCCCAGGGCCCUGCGGGCCACCCCCCCACCAUGGUCCAGGGCCCUGCGGGCCACCCCCUGGCCAUGGCCCAGGGCCCUGCGGGCCACCCCCCCACCAUGGUCCAGGGCCCUGCGGGCCUCCCCCUGGCCAUGGCCCAGGUCACCCACCCCCUGGUCCACAUCACUGAGGAAGUAGAAGAAAACAGGACACAAGAUGGCAAGCCUGAGAGAAUUGCCCAGCUGACCUGGAAUGAGGCCUAAACCACAAUCUUCUCUUCCUAAUAAACAGCCUCCUAGAGGCCACAUUCUAUUCUUUAAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-176.5 kcal/mol

Ensemble Metrics

Free Energy: -185.02

Frequency: 0.0000

Diversity: 169.8

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.....(((((((((...)).....((((.....)))).((((........)))).((((....))))..)))))))..((((....(((((((((((((........))))).))).(((((.....))))).((((((((((((((..((((((...........))))))))))))))..))))))...((((((((((((((((((((((..((((((...........))))))))))))))).(((.....))).)))))))).))))).......)))))))))...........((((((.((((((...((((.((......(((((..((...))..)))))....)).))))......((......))....))))))))))))........(((((...))))).....)))..........

Thermodynamic Ensemble Prediction

.,......,,,,,{,(({..{{{{{{{(((({....||||.(((({{{{{...,,||{(((({..{|||||.,|||||.{{((((..{{(((((({{(((((........|}}}}.))}{((({{.,,..|||||,|{{|||{(((((({,.{||||,.,,,,,,||..)))},}})}})))).,})))},...{{{||{{{|||{{|{((({(({|.((({{{.....,.,...))))}}})))))))),|||.....))},))))))))))}))).......,,,}},)))}},..}}..,.,|||||}||{|||...||||.,......,|{,{,}}||}}}))..,))),.)}),}.,,||{{{{(.(({{,...,,....,,,,,,,,,,,,........{{{{{...}))))}.}},})},.........