Forensic RNA Knowledge Base

Sequence Details

Symbol

NM_006248.4

Sequence Length

1431 nt

GC Content

0.5772

AGCACAGAGUUGGGAGUGACUCCAGAGCCUCCUGCAAGAUGCUGUUGAUUCUGCUGUCAGUGGCCUUGCUGGCCCUGAGCUCAGCUCAGAACUUAAAUGAAGAUGUCAGCCAGGAAGAAUCUCCCUCCCUAAUAGCAGGAAAUCCACAAGGAGCACCCCCACAAGGAGGCAACAAACCUCAAGGUCCCCCAUCUCCUCCAGGAAAGCCACAAGGACCACCCCCACAAGGAGGCAACCAGCCUCAAGGUCCCCCACCUCCUCCAGGAAAGCCACAAGGACCACCCCCACAAGGAGGCAACAAACCUCAAGGUCCCCCACCUCCAGGAAAGCCACAAGGACCACCCCCACAAGGAGACAAGUCCCGAAGUCCCCGAUCUCCUCCAGGAAAGCCACAAGGACCACCCCCACAAGGAGGCAACCAGCCUCAAGGUCCUCCACCUCCUCCAGGAAAGCCACAAGGACCACCCCCACAAGGAGGCAACAAACCUCAAGGUCCCCCACCUCCAGGAAAGCCACAAGGACCACCCCCACAAGGAGACAACAAGUCCCGAAGUUCUCGAUCUCCUCCAGGAAAGCCACAAGGACCACCCCCACAAGGAGGCAACCAGCCCCAAGGUCCCCCACCUCCUCCAGGAAAGCCACAAGGACCACCCCCACAAGGAGGCAACAAACCUCAAGGUCCCCCACCUCCAGGAAAGCCACAAGGACCACCCCCACAAGGAGACAACAAGUCCCAAAGUGCCCGAUCUCCUCCAGGAAAGCCACAAGGACCACCCCCACAAGGAGGCAACCAGCCCCAAGGUCCCCCACCUCCUCCAGGAAAGCCACAAGGACCACCCCCACAAGGAGGCAACAAACCUCAAGGUCCCCCACCUCCAGGAAAGCCACAAGGACCACCCCCACAAGGAGGCAGCAAGUCCCGAAGUUCUCGAUCUCCUCCAGGAAAGCCACAAGGACCACCCCCACAAGGAGGCAACCAGCCUCAAGGUCCCCCACCUCCUCCAGGAAAGCCACAAGGACCACCCCCACAAGGAGGCAACAAACCUCAAGGUCCCCCACCUCCAGGAAAGCCACAAGGACCACCCCCACAAGGAGGCAGCAAGUCCCGAAGUGCCCGAUCUCCUCCAGGAAAGCCACAAGGACCACCCCAACAAGAAGGCAACAAUCCUCAAGGUCCCCCACCUCCAGCAGGAGGCAAUCCCCAGCAGCCUCAGGCACCUCCUGCUGGACAGCCCCAGGGACCACCACGCCCUCCUCAAGGGGGCAGACCUUCCAGACCUCCCCAGUGACAGCCUCCCCAGUCAUCUAGGAUUCAAUGACAGGAAGUGAAUAAGAAGAUGAGAGUGAUUCAAAUGAUUCAAAUGCCAUGACAUUGGAAAAAGGUCAUCAUAGCUCUAACUUCUGUAUACCAAUAAAAUAAUUAGCUUGCAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-380.9 kcal/mol

Ensemble Metrics

Free Energy: -409.15

Frequency: 0.0000

Diversity: 471.66

Structure Visualization

Structure Prediction

MFE Structure Prediction

...(((((((((((.(((..(((...((.(((((..(((((((...((((.(((((((.(((((((((.((((.((((((...))))))........(((.....)))....(((......)))...(((......)))...(((....)))((..((......))..))............(((((.........(((.(((.........(((((...........(((((.....)))))..))))).........))).))).........)))))..........(((((......((((..((((......(((((.((....))....((((....(((....)).)....))))....((((.........(((.(((........((((((...........(((((.....)))))..))))))........))).))).........))))...........)))))......))))..))))......))))).((....))....(((((..........((.(((.....)))))(((.(((..((((((((((.((....((....))....)).......((.(((.....)))))..(((((......((((...((....))...))))............(((((......((((..((((......(((((.((....))....(((((..........((.(((.....)))))...(((.......((((...((....))...)))).......)))..((.(((.....)))))..)))))......((((...((....))...))))............)))))......))))..))))......))))).((....))....)))))..........))))).))...)))..))).)))......((((...((....))...)))).............(((((.....)))))..)))))....((((((...((....((....)).......))...)))))).......(((..((((.....))))..)))...))))))))).))))..((....)).)))))))))))....))).....))))....)))))..)).....))).)))))))))..((((((............((((((.....((((((((((((............(((...))).))))))))))))........)))))).....((((((.....)))))).).)))))..(((((..((((((.(((((((.....((((((...(((((...........)))))....)))))))))(((.((....)).)))...))..)).))))))....)))))...............)))))..........................

Thermodynamic Ensemble Prediction

.(((.,{,((((((.(((.{({(...((,((((({..{{,||{,,.{{{||{{((({{{({(((((((.((((.((((((...))))))..,,.....,|,,..,}}}}}.||{,,|......,,,,|}|..,.}}}||,..||{....)))|},},}},....|((((,......,,,...(((((......{{{(,,.(({.........(({{{...........(((((.....)))))..|||||....,{{{{|...||,...,,....))}},....,....,|||||......,(({..{(({.....,}}}||,||....|}....||{|,...,{,...,(({{{...,||,....|,,...,.}}||||...||,...,,...,|||{{...........(((((.....)))))..||||||...,,{{{|...||,...,,....)),},....,....,|||||......,(({..{|||.....,)))},,||....||....|||||....,,....((,(({.....}}},|{{..,,,}.|.||||||...||....}}....||,,,..........((.(((.....)))))..|||||....{{{{{{...||,...{{....)),,....,,....,}||||......,{{|..{|||.....,)))},,||....||....||||,.....,,,..((.(((.....)))))...|||.......||||...||....}}...,||},,.....,....((.(((.....)))))..|||||....{{{{{|...||....{{....)),,,...,,....,))}||......,{{|..{|||.....,))),,,|}....,,....||}}}..,,,,....|||||.||...|||.,{{...,,},)..,||||.,.||,...}}....||||,...........(((((.....)))))..|||||....{{{{{|...||,...{{....)),,....,,,...,}||||......,{{|..{|||.....,))),,}}}....,,...,||,|,.{{{((...{(({((|.{,..{{{{....{{{{,...{,{{{....||,..,||....))},..,,},.....|,,||,......},,...((((((.....((((((((((((....,,...|..{{|...))}.))))))))))))..,.....)))))).....}|||)))}...))))),.}.}))),..|,}||}|...|||,,.}}}}}}{{.|{{{{...,...,,.}}}}}.})..{{{.{{.{((((.{.(((((.......{((({|,.....({(......))).....))))))....)))))..)))))}}.,,,..............,}}}))..