Forensic RNA Knowledge Base

Sequence Details

Symbol

NM_021225.5

Sequence Length

983 nt

GC Content

0.4232

CUUUCUCUUCUUGGACUUUUAAAUUGUGGCUACCUAAAUUGAGUAUCUGGCAAGAGUAAGAUUAAGCAGUAAUUUGUUCCAAAGAAGAAUCUUCUACCAAGGAGCAACUUUAAAGAAUGAAAUUAACUUUCUUCUUGGGCCUGUUGGCUCUUAUUUCAUGUUUCACACCCAGUGAGAGUCAAAGAUUCUCCAGAAGACCAUAUCUACCUGGCCAGCUGCCACCACCUCCACUCUACAGGCCAAGAUGGGUUCCACCAAGUCCCCCACCUCCCUAUGACUCAAGACUUAAUUCACCACUUUCUCUUCCCUUUGUCCCAGGGCGAGUUCCACCAUCUUCUUUCUCUCGAUUUAGCCAAGCAGUCAUUCUAUCUCAACUCUUUCCAUUGGAAUCUAUUAGACAACCUCGACUCUUUCCGGGUUAUCCAAACCUACAUUUCCCACUAAGACCUUACUAUGUAGGACCUAUUAGGAUAUUAAAACCCCCAUUUCCUCCUAUUCCUUUUUUUCUUGCUAUUUACCUUCCUAUCUCUAACCCUGAGCCCCAAAUAAACAUCACCACCGCAGAUACAACAAUCACCACAAAUCCCCCCACCACUGCAACAGCAACCACCAGCACUUCCACAAAACCCACAAUGACGAUCAGCUCCUCAACAGUACCUAUCUCUUCAACACCAGAGCCUGCCACCUCCAUAUCAGCAGCAACCCCCGCAGCAUCUACUGAAAAUACUACUCAAAUUCUCGCCAACCGUCCUCACACAGUAUUGCUCAAUGCCACUGUCCAAGUUACGACUUCCAACCAAACUAUAUUAAGCAGCCCAGCCUUUAAAAGUUUUUGGCAAAAACUCUUUGCCAUUUUUGGUUGAACAUGCAAUAAAUGAUAUUUUCCAAACUGCUCUGAUAUCUUAGAAGAAAUAAACUGCAAUGAUUUUGAUGGAACCAACCCUGAUCUAACCAGCACACUAAAUAAAGUAUUUGAGCAAUAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-163.4 kcal/mol

Ensemble Metrics

Free Energy: -181.11

Frequency: 0.0000

Diversity: 208.57

Structure Visualization

Structure Prediction

MFE Structure Prediction

.......(((....(((((......((((((...........(((..(((((((((.((((............(((((((..(((((...))))).....))))))).....(((((.((((.....))))))))).((((((((((((((((((...(((...)))...))))))))))).(((((((.....)))....))))...((((.....)))).............)))))))..(((((((((((..(((..............((((((..........................((((.......))))((((..................)))).....((...))))))))............))).....))))))))))).((.((((.((........)))))).))....(((((((...................)))))))......(((((...................)))))....)))).)))))))))..)))........(((.......))).....................((((..............................))))....((........)).......................((((((.(((((((((((...(((.(((((.......(((........))).(((((((.((((.......(((......)))..........................(((.((...(((((...((.....)).)))))...))..))).....((((((((.........((......)).............(((((((.....)))))))..))))))))..(((.......))).............)))))))))))....))))).))).))))........)))).))).......)))))).....))).))).....)))))....)))......

Thermodynamic Ensemble Prediction

.....,,.,,..,,(((({....,,((((({.......,,{.(((,,(((((((((.((({..,,,.,,,,..{((((((..(((((...))))).....))))))).....(((((.((({.....})))))))).((((((((((((((((((...(((...)))...))))))))))).{{{{,,,...,.}}}....})))...{(((.....)))}.............})))))).,((((((({({{..,{{,,........,,,,..{{(,.,,{,,,................,..,{|{..},,..)))){|{|..................}}}),....{,...},||}},,..............,.....})))))}}}}}.((.((((.{(........}))))).))....(((((((...................)))))))......,((((................,,,),})}....}}}}.}))))))}}..}},........(((.......))).....................,|||}},,....,,....................,|||....||,.......},...................,,..((((((.{{{((({((((...(((.(((((.....((((((..,........((((((({,((.......}|,|}.....,||{.........................,({.,,...(((((...((.....)).)))))...|},.,,)}}...{{({((({,,.....,,((......)),.,.,,.}},...(((((((.....)))))))..,}))))))....},,......))}))}..........))))))......,.))))).))).))))........)))}.))).......)))))).....})}.}}}.....}))))....)))......