Basic Information

Symbol
piR-hsa-5936
RNA class
piRNA
Alias
hsa-piR-5746 DQ575658.1 hsa_piRNA_18301 hsa_piR_004152 piR-43770 URS0000115369 PIR36769
Location (GRCh38)
5:139760974-139760999
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Tissue/body fluid identification Mixture deconvolution
External database
piRBase piRNAdb RNAcentral

Sequence & Structure

Transcript
piR-hsa-5936
Sequence length
26 nt
GC content
0.5000

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-4.70 kcal/mol
Thermodynamic ensemble
Free energy: -4.83 kcal/mol
Frequency: 0.8055
Diversity: 2.53
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
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Thermodynamic Ensemble Prediction
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Forensic Context

A study in humans using massively parallel sequencing and TaqMan RT-qPCR identified 376 piRNAs with acceptable discriminating ability for biological samples like venous blood, menstrual blood, saliva, semen, vaginal secretions, and skin [Wang et al. DOI:10.1016/j.fsigen.2019.07.015].