Basic Information

Symbol
piR-hsa-820
RNA class
piRNA
Alias
hsa-piR-628 DQ570540.1 hsa_piRNA_31419 hsa_piR_000441 piR-30652 URS000057BC8B PIR31651
Location (GRCh38)
Forensic tag(s)
Tissue/body fluid identification

Sequence & Structure

Transcript
piR-hsa-820
Sequence length
29 nt
GC content
0.4138

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-1.50 kcal/mol
Thermodynamic ensemble
Free energy: -2.58 kcal/mol
Frequency: 0.1740
Diversity: 7.18
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
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Thermodynamic Ensemble Prediction
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Forensic Context

A study in humans demonstrated that the piR-hsa-820 was not identified among the 376 piRNAs initially characterized from forensically relevant biological fluids, and subsequent validation of selected candidates did not include this specific piRNA [Wang et al. DOI:10.1016/j.fsigen.2019.07.015]. A review of non-coding RNAs in forensic science also did not report any specific findings or applications for the piR-hsa-820 in areas such as body fluid identification, postmortem interval estimation, or cause of death determination [Li et al. DOI:10.1093/fsr/owad003]. A study in humans using massively parallel sequencing identified the piR-hsa-820 as an absolute specific marker for venous blood, demonstrating high specificity and being newly identified in this research [Liu et al. DOI:10.3390/genes13091530].