Basic Information

Symbol
piR-hsa-1254
RNA class
piRNA
Alias
hsa-piR-1091 DQ571003.1 hsa_piRNA_30956 hsa_piR_000805 piR-31115 URS000034C070 PIR32114
Location (GRCh38)
7:214199000-214199031
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Tissue/body fluid identification
External database
piRBase piRNAdb RNAcentral

Sequence & Structure

Transcript
piR-hsa-1254
Sequence length
32 nt
GC content
0.5625

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-6.00 kcal/mol
Thermodynamic ensemble
Free energy: -6.40 kcal/mol
Frequency: 0.5267
Diversity: 2.49
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
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Thermodynamic Ensemble Prediction
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Forensic Context

A study in human venous blood identified the piR-hsa-1254 as an absolute specific marker (ASM) with very high expression and high specificity, being classified as level IV in four out of five pairwise comparisons and level III in one comparison [Liu et al. DOI:10.3390/genes13091530].