Basic Information
Symbol
SNAR-I
RNA Class
snoRNA
Alias
Small NF90 (ILF3) Associated RNA I
Small ILF3/NF90-Associated RNA 3
Small ILF3/NF90-Associated RNA I
SnaR-3
Location (GRCh38)
3:190877930-190878050
Forensic tag(s)
Other applications
External database
Sequence & Structure
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-40.10 kcal/mol
Thermodynamic ensemble
Free energy:
-43.30 kcal/mol
Frequency:
0.0056
Diversity:
21.69
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
...................(((...))).((.(((....(((((((..........)))).(((((((((......))))..)))))..)))...)))))(((((((((...)))))))))
Thermodynamic Ensemble Prediction
.,,{{,.....,}}},...((,...})).((.(((,,,,(((({{,..,,,.....,))}.(((((((((......))))..))))).}))).},)))))(((((((({...}))))))))
Summary
No relevant information is available at the moment.
Forensic Context
A study in primates demonstrated that the SNAR-I is a small non-coding RNA located on chromosome 3, derived from a major segmental duplication pathway and co-immunoprecipitated with the NF90b protein [Parrott et al. DOI:10.1093/nar/gkq856]. Analysis of a single nucleotide polymorphism (SNP rs13323015) within the SNAR-I sequence displayed transition mutations between different human ethnic groups [Parrott et al. DOI:10.4161/mge.18478].