Basic Information
Symbol
SNAR-C4
RNA Class
snoRNA
Alias
Small NF90 (ILF3) Associated RNA C4
Small ILF3/NF90-Associated RNA C4
Location (GRCh38)
19:47939541-47939660
Forensic tag(s)
Other applications
External database
Sequence & Structure
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-58.90 kcal/mol
Thermodynamic ensemble
Free energy:
-60.88 kcal/mol
Frequency:
0.0403
Diversity:
12.29
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.((((((((...))))))))(((....((.((.((((((((((((((........)))))))))))))).)).))....)))(((((((.......))))))).................
Thermodynamic Ensemble Prediction
.((((((((...))))))))(((....((.((.((((((((((((((........)))))))))))))).)).))....)))(((((((.......})))))),{((({....,})))}.
Summary
No relevant information is available at the moment.
Forensic Context
A study in primates demonstrated that the SNAR-C4 is a small non-coding RNA expressed in human testis and at low levels in the adult brain, and it co-immunoprecipitates with the NF90b protein [Parrott et al. DOI:10.1093/nar/gkq856]. This RNA is a member of the snaR family, which evolved exclusively in African Great Apes through segmental duplication from retrotransposon ancestors, and its expression is restricted to specific tissues [Parrott et al. DOI:10.4161/mge.18478].