Basic Information
Symbol
SNAR-D
RNA Class
snoRNA
Alias
Small NF90 (ILF3) Associated RNA D
Small ILF3/NF90-Associated RNA D
Location (GRCh38)
19:50140202-50140320
Forensic tag(s)
Other applications
External database
Sequence & Structure
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-52.40 kcal/mol
Thermodynamic ensemble
Free energy:
-55.48 kcal/mol
Frequency:
0.0067
Diversity:
15.89
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((((...))))))))).(((((.((..((((((((((((((..........)))))))))))))))).)))))....(((((((.......)))))))................
Thermodynamic Ensemble Prediction
(((((((({...})))))))),(((((.((..((((((((((((((........}.)))))))))))))))).))))}.,..(((((((.......})))))),,{{{,....,}}},.
Summary
No relevant information is available at the moment.
Forensic Context
A study in primates demonstrated that the SNAR-D is a small non-coding RNA and a pseudogene of snaR-A, located within the chromosome 19 clusters in humans [Parrott, Andrew M.; Mathews, Michael B. DOI: 10.4161/mge.18478]. Its transcription status was not determined in the provided analyses [Parrott, Andrew M.; Tsai, Michael; Batchu, Priyanka; Ryan, Karen; Ozer, Harvey L.; Tian, Bin; Mathews, Michael B. DOI: 10.1093/nar/gkq856].