Basic Information

Symbol
SNORD14D
RNA Class
snoRNA
Alias
Small Nucleolar RNA, C/D Box 14D RNA, Small Nucleolar SnoDB0475 SNORD14B SnoRNA
Location (GRCh38)
11:123058909-123058995
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Mechanical injury analysis
External database
HGNC NCBI Ensembl RNAcentral

Sequence & Structure

Transcript
SNORD14D
Sequence length
87 nt
GC content
0.4368

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-14.50 kcal/mol
Thermodynamic ensemble
Free energy: -16.99 kcal/mol
Frequency: 0.0176
Diversity: 23.91
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
..(((((((..((((.........))))))))))).......................(((((.(((......)))...))).))..
Thermodynamic Ensemble Prediction
..(((((((.,((((.,.......))))))))))}..,,..,{{{..,,{,...|.,||{{{,.{((......)))...))).)),.
Summary

No relevant information is available at the moment.

Forensic Context

A study in human traumatic brain injury (TBI) patients demonstrated that the lncRNA ENST00000384390 (SNORD14D) was one of the five most significantly up-regulated lncRNAs in brain contusion tissue compared to adjacent control tissue, identifying it as a potential biomarker for TBI [Yang et al. DOI:10.4103/1673-5374.247467].