Basic Information

Symbol
SNORD25
RNA Class
snoRNA
Alias
Small Nucleolar RNA, C/D Box 25 U25 RNA, U25 Small Nucleolar RNU25 SnoDB0490
Location (GRCh38)
11:62855564-62855632
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Cause of death analysis Sudden cardiac death diagnosis
External database
HGNC NCBI Ensembl OMIM RNAcentral

Sequence & Structure

Transcript
SNORD25
Sequence length
67 nt
GC content
0.4478

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-14.50 kcal/mol
Thermodynamic ensemble
Free energy: -15.37 kcal/mol
Frequency: 0.2434
Diversity: 7.02
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((..((........(((((((.((.((......)).)).)))))))........))..))))).
Thermodynamic Ensemble Prediction
{((((..({...,....(((((((.((.((......)).)).))))))).......,))..))))}.
Summary

No relevant information is available at the moment.

Forensic Context

A study in human cadavers demonstrated that SNORD25, a small nucleolar RNA, showed no significant differences in Cq values between hypothermia death groups and chronic ischemic heart disease groups, indicating stable expression across these causes of death [Kaija et al. DOI:10.1007/S00414-019-02041-0].