Basic Information

Symbol
SNORD28
RNA Class
snoRNA
Alias
Small Nucleolar RNA, C/D Box 28 SNORD28A U28 RNA, U28 Small Nucleolar RNU28 SnoDB0487 SNORD28
Location (GRCh38)
11:62854621-62854695
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Sudden cardiac death diagnosis
External database
HGNC NCBI Ensembl OMIM RNAcentral

Sequence & Structure

Transcript
SNORD28
Sequence length
75 nt
GC content
0.3600

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-13.80 kcal/mol
Thermodynamic ensemble
Free energy: -15.02 kcal/mol
Frequency: 0.1380
Diversity: 8.04
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((...(((((..((...((((..(((.((....)).)))..)))).....))..)))))..))))))....
Thermodynamic Ensemble Prediction
((((((...(((((..((.{,((((..(((.((....)).)))..))))..},.))..)))))..))))))....
Summary

No relevant information is available at the moment.

Forensic Context

A study in human patients identified the SNORD28 as one of ten hub genes for predicting heart failure progression after myocardial infarction via a support vector machine recursive feature elimination algorithm, where it was significantly downregulated in heart failure patients and negatively correlated with the MI-to-HF transition [Xu et al. DOI:10.3389/fgene.2025.1592985].