Basic Information

Symbol
SNORD47
RNA Class
snoRNA
Alias
Small Nucleolar RNA, C/D Box 47 RNA, U47 Small Nuclear U47 SnoDB0987 SNORD47 RNU47
Location (GRCh38)
1:173864369-173864445
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Tissue/body fluid identification
External database
HGNC NCBI RNAcentral

Sequence & Structure

Transcript
SNORD47
Sequence length
77 nt
GC content
0.3117

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-5.50 kcal/mol
Thermodynamic ensemble
Free energy: -7.66 kcal/mol
Frequency: 0.0302
Diversity: 14.27
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
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Thermodynamic Ensemble Prediction
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Summary

No relevant information is available at the moment.

Forensic Context

A study in human organ tissue samples evaluated 15 candidate reference genes for miRNA qPCR normalization in forensic organ tissue identification [Sauer et al. DOI:10.1016/j.fsigen.2014.08.005].