Basic Information

Symbol
SNORD48
RNA Class
snoRNA
Alias
Small Nucleolar RNA, C/D Box 48 U48 RNA, U48 Small Nuclear RNU48 SnoDB0297 SNORD48
Location (GRCh38)
6:31835263-31835326
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Other applications
External database
HGNC NCBI Ensembl RNAcentral

Sequence & Structure

Transcript
SNORD48
Sequence length
63 nt
GC content
0.5714

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-13.50 kcal/mol
Thermodynamic ensemble
Free energy: -14.73 kcal/mol
Frequency: 0.1357
Diversity: 14.60
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
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Thermodynamic Ensemble Prediction
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Summary

No relevant information is available at the moment.

Forensic Context

A study in human body fluids identified the SNORD48 as a candidate reference gene but excluded it from analysis due to scarce unspecific amplification in RT(-)-controls, rendering it unsuitable for normalization in that context [Sauer et al. DOI:10.1016/j.fsigen.2014.08.005].