Basic Information

Symbol
SNORD49A
RNA Class
snoRNA
Alias
Small Nucleolar RNA, C/D Box 49A U49A U49 RNA, U49 Small Nuclear RNU49 SnoDB0810 SNORD49A
Location (GRCh38)
17:16440036-16440106
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Tissue/body fluid identification
External database
HGNC NCBI Ensembl RNAcentral

Sequence & Structure

Transcript
SNORD49A
Sequence length
71 nt
GC content
0.4366

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-16.60 kcal/mol
Thermodynamic ensemble
Free energy: -17.75 kcal/mol
Frequency: 0.1547
Diversity: 16.73
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
...........(((((...(((((((((..((((((.........))))))...)))..)))))).)))))
Thermodynamic Ensemble Prediction
...,,....,.,((((...((((({{((..((((((.........))))))..,}}}..)))))).)))),
Summary

No relevant information is available at the moment.

Forensic Context

A study in human body fluids demonstrated that the SNORD49A showed good stability, often being paired with SNORD24 as a stable pair by the geNorm algorithm [Sauer et al. DOI:10.1016/j.fsigen.2014.08.005].