Basic Information

Symbol
SNORD58B
RNA Class
snoRNA
Alias
Small Nucleolar RNA, C/D Box 58B U58b RNA, U58B Small Nuclear RNU58B SnoDB0870 SNORD58B
Location (GRCh38)
18:49491664-49491729
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Tissue/body fluid identification
External database
HGNC NCBI Ensembl RNAcentral

Sequence & Structure

Transcript
SNORD58B
Sequence length
66 nt
GC content
0.4091

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-6.30 kcal/mol
Thermodynamic ensemble
Free energy: -8.40 kcal/mol
Frequency: 0.0332
Diversity: 20.87
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((...((.((((((..((((..((....))..)))).))))..........)).))...)))).
Thermodynamic Ensemble Prediction
((((...({.{{||{((({,(({...}}}..)},.,...,,,}..........,},}}...)))).
Summary

No relevant information is available at the moment.

Forensic Context

A study in human organ tissue samples evaluated 15 candidate reference genes for miRNA qPCR normalization in forensic organ tissue identification, where the SNORD58B was assessed for expression stability [Sauer et al. DOI:10.1016/j.fsigen.2014.08.005].