Basic Information

Symbol
SNORA48
RNA Class
snoRNA
Alias
Small Nucleolar RNA, H/ACA Box 48 SNORA48A ACA48 ACA48 SnoRNA SnoDB0835 SNORA48
Location (GRCh38)
17:7574713-7574847
UCSC Genome Browser Search in Marker Scope
Forensic tag(s)
Mechanical injury analysis Forensic psychiatry evaluation
External database
HGNC NCBI Ensembl RNAcentral

Sequence & Structure

Transcript
SNORA48
Sequence length
135 nt
GC content
0.5333

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-44.80 kcal/mol
Thermodynamic ensemble
Free energy: -46.83 kcal/mol
Frequency: 0.0374
Diversity: 16.32
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((((..((((...(((.((((((........))))))...)))...)))).)))))))).(((((....)))))....((((...(((...(((.(((.((....)).))).))).)))))))........
Thermodynamic Ensemble Prediction
((((((((..((((.,,(((.((((((........))))))...))).,.)))).)))))))).{((({....,}))}....((((...(((...(((.(((.((....)).))).))).)))))))........
Summary

No relevant information is available at the moment.

Forensic Context

A study in humans demonstrated that the SNORA48 was significantly decreased in peripheral blood mononuclear cells from veterans with mild traumatic brain injury and post-traumatic stress disorder compared to those with PTSD only, indicating its potential as a diagnostic biomarker [Li et al. DOI:10.1016/j.neuint.2023.105643].