Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ABCA1_0004400

Sequence Length

159 nt

GC Content

0.4088

ACCCGUAUGCUUGGUUUUCAUGUGAUGACAGAGAAAACAAAACACUGCAGAUAUCCUUCAGGACCUGACAGGAAGAAACAUUUCGGAUUAUCUGGUGAAGACGUAUGUGCAGAUCAUAGCCAAAAGCUUAAAGAACAAGAUCUGGGUGAAUGAGUUUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-29.30 kcal/mol

Ensemble Metrics

Free Energy: -32.14

Frequency: 0.0100

Diversity: 19.02

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((.((.((((((((((.(((....)))..))))))......(((((.((((.((((...(((.((.((...(((....)))...)).)).)))))))..)))).))))).....(((.....))).......)))))).)))))............

Thermodynamic Ensemble Prediction

(((((.{{.((((((((((.(((....)))..))))))......(((((.((((.(((({..{((.((.,{,,.{{,....)))...,,.)).)))))))..)))).))))).....(((.....))).......))))}}.)))))..,......}..