Sequence Details

BLAST PRIMER
Symbol
hsa_ABCA1_0005500
Sequence Length
373 nt
GC Content
0.5174
AAUCCAGAGAGACAGACUUGCUCAGUGGGAUGGAUGGCAAAGGGUCCUACCAGGUGAAAGGCUGGAAACUUACACAGCAACAGUUUGUGGCCCUUUUGUGGAAGAGACUGCUAAUUGCCAGACGGAGUCGGAAAGGAUUUUUUGCUCAGAUUGUCUUGCCAGCUGUGUUUGUCUGCAUUGCCCUUGUGUUCAGCCUGAUCGUGCCACCCUUUGGCAAGUACCCCAGCCUGGAACUUCAGCCCUGGAUGUACAACGAACAGUACACAUUUGUCAGCAAUGAUGCUCCUGAGGACACGGGAACCCUGGAACUCUUAAACGCCCUCACCAAAGACCCUGGCUUCGGGACCCGCUGUAUGGAAGGAAACCCAAUCCC

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-101.40 kcal/mol
Ensemble Metrics
Free Energy: -108.38
Frequency: 0.0000
Diversity: 114.41
Structure Visualization
Structure Prediction
MFE Structure Prediction
..((((................(((((((.(.((.(((..((((((......(((((..(((((.(.((..(((((((..((((((.(..(((....).)).).))))))......((.((((((((.((((((....)))))))))....))))).))..)))))))..)).).))...(((.(((.(((((.(((.((((((((.....))))..((((.((((.((((....))))..))))..)))).)))).)))............((((....)))).))))).))).)))...................))).)))))...)))))).))))).)..)))))))..)))).(((.......))).
Thermodynamic Ensemble Prediction
{.((((..(((.({....)))))..)))}.}(({,{(({..(((((((.((((({((.{((((({{.((..(((((((..((((((.(..(((....}.)).}.))))))......((.((((((((,{(((((....})))}))))....))))).))..)))))))..)).,|||,.,|...|||||}}}|}||,.||{(((((.....))))}.(({{.((((.((({....})))..))))..||||.,,,,.,,)}}}}....,||,{{{{.,,.)}}}.,|({{..|.{(({...}}}}|..,,}......,,,.}},,,...},,))))),,..))))))),,))}.|{{..,,....)),.,,)}
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