Sequence Details

BLAST PRIMER
Symbol
hsa_ABCA1_0011400
Sequence Length
291 nt
GC Content
0.4261
GAAGGAUGUAUCUGGAAAGAGAUGUUCCUUAUUAUAAUAAAAUGAAAUUGUAAUACUCUUGGAUUUUGUGCAGCACGAAUUCUUUAUAGAGAGUUGGUCCUCCCAGAGAAUUAAGAAUACUCAGUUUCUGGACCCUGUUCCCAGAUCAUACCCUAGAAUGUGACCUUAGAAACACACUUCAGGAUUCAUACCUUUGAUUGACCAUCAAAAAGUUUUUGUAUCGGCCAGGUGUGGUGGCUCACGCCUGUAAUCCCACCACUUUCGGAUGCCACGGCGGGCAGAUCACGUGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-64.40 kcal/mol
Ensemble Metrics
Free Energy: -71.03
Frequency: 0.0000
Diversity: 98.84
Structure Visualization
Structure Prediction
MFE Structure Prediction
.(((((..(((((......))))).)))))((((((((........))))))))(((((((((.((((((...)))))).))).....))))))(((((...(((((((....((....))...)))))))...(((....))).......(((.(((((((..........)))).))))))..(((......)))..))))).(((((...))))).......(((((((((....)))))))))...........(((.((((((((......))))..)).)).)))
Thermodynamic Ensemble Prediction
{{{(((,,{((((,,..,.||}}}.}}}}|((((((((........))))))))|((((((((.((((((...)))))}.))}.....)))))),{||{|,.,{{(({{|||.{{,...}}.,})))))))},,||,,,.})))},,,,..(((.(((((((..........)))).))))))..{((....,.|||,,,,,,||||{{,...,}}}).,}.}}.(((((((({....}))))))))..,|||.....,,,.,||||(({......)))},.}},)),)})
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