Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ABCA1_0014300

Sequence Length

250 nt

GC Content

0.3360

AAACCCACAAUGGAUUUGCUAGAAAUAAUGGAACGUCCUGUUUGGACAGGAUAUAACCAUUUCUCAGCUAGAGGAUAUUGUUGGAAUGAAGAAAGAUAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGAUGUACUGUUAUUUCCACAUGUUGUAGCUGGGGAACGUGCUACUCAGAGAGGUUAAGUAACUUGUCUGAGGUCCACACCACUAACAAGGAGCACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-44.62 kcal/mol

Ensemble Metrics

Free Energy: -49.98

Frequency: 0.0002

Diversity: 32.40

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((.(((...))).))((((.......((((...(((((((....)))))))....))))((((((((((.((.(...(((.((((..((.(....................................................................).))..)))))))).)).))))))))))..(((...((((((.(((((....))))).))))))...))).((........))))))...

Thermodynamic Ensemble Prediction

,,,.(({...})).}|{{{{.......((((...(((((((....)))))))....))))((((((((((.({,({,.{({,((((,,({......................................................................}.)),,)))))))),)).))))))))))..(((,,.((((((.(((((....))))).))))))...}}}.((........)))))),..