Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ABCA1_0014400

Sequence Length

158 nt

GC Content

0.5949

UUAAUGACCAGCCACGGCGUCCCUGCUGUGAGCUCUGGCCGCUGCCUUCCAGGGCUCCCGAGCCACACGCUGGGGGUGCUGGCUGAGGGAACAUGGCUUGUUGGCCUCAGCUGAGGUUGCUGCUGUGGAAGAACCUCACUUUCAGAAGAAGACAAACA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-56.10 kcal/mol

Ensemble Metrics

Free Energy: -58.58

Frequency: 0.0179

Diversity: 38.15

Structure Visualization

Structure Prediction

MFE Structure Prediction

..............((((((((((((((((.((((.((((.(((.....)))))))...)))))))).)).))))))))))(((((((.((((.....))))..)))))))(((((((.((........))))))))).((((....)))).......

Thermodynamic Ensemble Prediction

.....,...{{{{{(((({,,,,|||||||.|||,.(((,.,,|}}...|||,|||{{{,|||,,,,.))})))))),)))(((((((.((((.....))))..)))))))(((((((.((........))))))))),{(({....)))}.......