Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ABCA1_0015000

Sequence Length

183 nt

GC Content

0.5137

UGGCAAGAGAGUAGGCUGGAGUCACAGAAGGGAGGCCAGGUAGACCUUGGUGAGCACUGGACUCUAUGUUCAGGUGCUGAGGAGCUGGCAAAAGGUUUUAAGUCGGGGAGAGGCAUGUUCAGAUAUUUGGUCUAGCUGAGUAACUUUGGGUGCUCUGUGACAAAUGGUUGGGAGACCAGUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-49.00 kcal/mol

Ensemble Metrics

Free Energy: -52.03

Frequency: 0.0073

Diversity: 52.46

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(((...(((((..(((((((.((...((..((((((((((..(((((((..((.((((((.....)))))))))))))))..(((((............)))))(((.(....).)))...))))))))))..))..)).))))))).)))))))).)(...(((((....)))))....)

Thermodynamic Ensemble Prediction

(.((,..{(((({..(((((((.((...((..((((((((((..(({{,,(.{((,((((((.....))))))}})))}}}}..(((((........,,..))))),,,.,,,},},))),..))))))))))..))..)).))))))).)))))))).)(...(((((....)))))....)