Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_ABCC1_0009000

Sequence Length

244 nt

GC Content

0.3402

GUGUGAGCCACCAUGCCAGCCCUUUAACUGUUUAAGUGGUUCAGAAAAAGAUGAUGUGUUUGCAUGUGUGUGUGUGUUUGUGUGUGCAUGUCAAUGGAUACAGACAGAGAAUGAUACUGCAAACGUGGCAACGUGUUAACAAUGGUGAGUUGAGUGAAUUCUUAGUAUGAUUUGAGUAAUUUUUCUAUAAGUUUGAAAUUAUUUUAGAACAAAACAUGAAAGUAUUUUACCUUUUAUUAUAAAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-44.80 kcal/mol

Ensemble Metrics

Free Energy: -51.72

Frequency: 0.0000

Diversity: 78.85

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.((((((((.....(((........))).....)))))))).)..((.(((.((((((((((.((((...(.(((((((((...(((....))).))))))))).).....)))))))))))...))).))).))..((((.....))))((.((((((((((......))))).)))))..)).......((((((..(((((..........)))))..)))))).)(((((...)))))

Thermodynamic Ensemble Prediction

.{.((((((((...,.(((........))).....)))))))).}.....{(({{{{(((((((.((((.{.(.((((({((({(.(((....))).))))))))).).,...)))))))))))}|,|||.,||,}}.,|.,,|||{,||||,{.,{{{{|{||{.,{{.{|||||,||||{{.,....,,,,,}}}}}})}}}}})},},...,,||||||...,}}}})||||}}},)....